BUG:
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It's bit hard to explain, but easy to reproduce:

1) enlarge vertically taskbar on primary display to facliltate 2 rows of tasks
2) start-run-services.msc
3) disable themes service

Now look at your second display and you will notice that tasks are taller than on primary display and that you can't have two rows of tasks.

This is important for Windows 2008 server users where themes are disabled.

FEATURE (THAT WOULD SOLVE PROBLEM TEMPORARILY)
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May I define height of the task (button) on the 2rd taskbar so that I can have two rows of tasks there as well ? I don't want to enlarge height of taskbar as then it wouldn't look same as on primary display.

FIX
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If themes are disabled you need to find correct way to calculate task button height.

Thanks.

Second display task bar:

Primary display task bar:

The height of the button? Not that I know of. You can change the height of the second task bar however. I am sure Jon will have a fix for this when he returns.

I dropped two tiny images to help you understand better this. You can see that on 2rd taskbar task button has some more space above task text: "OCA Oracle Database 1...", while on 1st taskbar "Process Monitor" has less top and bottom margins...

I am using windows 7 x64 without themes and on windows 2008 server r2 enterprise.

Thanks for your replies. I was bit off, yes it does happen after reboot. But i see you fixed it already. Looking forward to use new beta ! Many thanks for your fix, I use windows without skins as remote desktop is usually slow.